Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922559.1_cds_XP_016471324.1_63678
CDS Infomation

[gene=LOC107793464] [db_xref=GeneID:107793464] [protein=filaggrin-like] [protein_id=XP_016471324.1] [location=complement(join(174373..174522,174955..175092,175182..175280,175942..176348,176421..177161,177819..177912))] [gbkey=CDS]
Sequence

ATGGGGCACAGAAATTTATTCAACATGTCTCAGATATTTGAGACAGAAGATGATCAGAGA
TGGAATCTTCCAGAGCAGCCACCTTTGTCTTTCGCACGGGCTGGTGCTCCTGAAAGCAGT
AATCTTGTTTATCCAGTGGACAATATGTCAATCGACGGGACACACCATTCTGCTCAGGGG
AGTTATGCCTCCAGGCCAAGTGGATATTCTTCCTCGAATCAAAATATGGAAATTCCACAC
TGTCAGCCACAGGTTCAAGGTCCTCTTCATGATCCTTTTCTGCATTCAGGTACTGGAGGT
TTTCATATGATCCATGAGAGTTATCCACATCAAGCATCTTCATCAACCCATGGAGGTCAG
ACGTATCATGGGGTGGATGGTGGCCTCGTTGACCTCACAATGGGCAGCGGGAGAGGGCGA
TACAAACGTAAGAGTCCTGGTATACCCGCAGGTGGCGAAAGTGGTAGTACGAGCAGATAC
TTCGATGCTGGCAGTTCATCTGATATCCCTTCTGACTCTTGGCATGAGAAACAAAATCCA
GACTCTCATTACACGACTTGGGGTTTACATCCTAGTTACAGAGGTAATAATCTGTCTATT
GGAGGTGAAGGTTCTCAAAGGAATGTAAGAAGCAGATCTGCATTTGATCTGCAAAGTAAT
GTGGGAAGGGCACATATAACAAGTAATCCTTCACATCACTCTAACAGCAGTAGAACAACC
ACTGATTATTGTAGTTCAGTGAACTATCTAGCTCCAAGTTCTAATTCTTCAACAAGGGAA
TGGAACCATGCAGTCATGCCCCCTGCTGTCACTCATGGGAGGAATTTCTCTTCTGATACA
GGCTTCTATTGTTATGATATGAACCACTACGATATGGTAACTGGCAATATATCTACCTCT
CTGGAGATGGGGAGTTACCACAATGATTTCACCCCAAACAGAAGTTCCCTTCCTCAACAT
TTGCCTGGCAACTTGCAATCTTCGAGGGGAGTCCGAAGTAGCTACATTCAAAGATCTTCC
CCTTCTTTCAGGACTTCGTCAAGCTATTTGCGCCATGGGCATGTTGGTACTTCAGATGAC
GCATCACAGTTGTTTGCTGAAGGTTACTCCTCAAGACATTCACGTCCATTGTCTACTCTA
GGACCACGCAGTAGTGACCGAAATGGGAGAACTAGGATATCTAGTGATAGGTACAGATCA
TTGGCTGGTGAGGCAGGTTTTCGTGAGCAACTTGCATCTGAGGGTGTTATTATTCCAGAT
CGCTCTACTTTATACGGATCCAGAAGCCTGTTTGATCAGCATAGGGACATGAGACTTGAT
ATTGACAACATGGGCTATGAGGAACTTCTTGCACTTGGAGAAAGAATTGGTCACGTCAAT
ACTGGCTTGTCGGAGGAGCTGATTTCAAAGTGCATGACCGAGTCAATTTATTGCTCCTCT
GACCAAATTCATGAGGAAGGAACTTGTGTTATCTGTTTGGAAGAGTATGTGAATATGGAT
GATGTTGGGAGCTTGAAATCATGCAGCCATGATTTTCATGTCGGGTGCATAAGAAGATGG
TTGTCGATGAAGAACTCGTGTCCGATCTGCAAGAAAACTGCATTGGATGACGATATGAAA
GAAAAATGA

Peptide Sequence

PEP ID

XP_016471324.1
PEP Infomation

PREDICTED: filaggrin-like [Nicotiana tabacum]
Sequence

MGHRNLFNMSQIFETEDDQRWNLPEQPPLSFARAGAPESSNLVYPVDNMSIDGTHHSAQG
SYASRPSGYSSSNQNMEIPHCQPQVQGPLHDPFLHSGTGGFHMIHESYPHQASSSTHGGQ
TYHGVDGGLVDLTMGSGRGRYKRKSPGIPAGGESGSTSRYFDAGSSSDIPSDSWHEKQNP
DSHYTTWGLHPSYRGNNLSIGGEGSQRNVRSRSAFDLQSNVGRAHITSNPSHHSNSSRTT
TDYCSSVNYLAPSSNSSTREWNHAVMPPAVTHGRNFSSDTGFYCYDMNHYDMVTGNISTS
LEMGSYHNDFTPNRSSLPQHLPGNLQSSRGVRSSYIQRSSPSFRTSSSYLRHGHVGTSDD
ASQLFAEGYSSRHSRPLSTLGPRSSDRNGRTRISSDRYRSLAGEAGFREQLASEGVIIPD
RSTLYGSRSLFDQHRDMRLDIDNMGYEELLALGERIGHVNTGLSEELISKCMTESIYCSS
DQIHEEGTCVICLEEYVNMDDVGSLKSCSHDFHVGCIRRWLSMKNSCPICKKTALDDDMK
EK

Transcript Sequence

Gene sequence data has not been registered.